Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Rps4l-201ENSMUST00000071745 943 ntBASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3bQ9ES34 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Gm12497-201ENSMUST00000138778 237 ntBASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3bQ9ES34 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Gm11452-201ENSMUST00000122376 690 ntBASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3bQ9ES34 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Gm4459-201ENSMUST00000118750 468 ntBASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3bQ9ES34 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ube3bQ9ES34 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ube3bQ9ES34 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms