Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Gm15378-201ENSMUST00000121894 207 ntBASIC14.97□□□□□ -0.01
Dap3Q9ER88 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Gm24841-201ENSMUST00000158676 357 ntBASIC14.97□□□□□ -0.01
Dap3Q9ER88 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.96□□□□□ -0.01
Dap3Q9ER88 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Dap3Q9ER88 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Dap3Q9ER88 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Dap3Q9ER88 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Gm5643-201ENSMUST00000117081 966 ntBASIC14.95□□□□□ -0.02
Dap3Q9ER88 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Dap3Q9ER88 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Dap3Q9ER88 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Gm37025-201ENSMUST00000195159 829 ntBASIC14.94□□□□□ -0.02
Dap3Q9ER88 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Dap3Q9ER88 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.93□□□□□ -0.02
Dap3Q9ER88 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dap3Q9ER88 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms