Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.46■□□□□ 0.71
Chmp4cQ9D7F7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4cQ9D7F7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4cQ9D7F7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4cQ9D7F7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4cQ9D7F7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4cQ9D7F7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Gm13186-201ENSMUST00000118031 316 ntBASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4cQ9D7F7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4cQ9D7F7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Gm15565-201ENSMUST00000118890 427 ntBASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms