Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Mir5126-201ENSMUST00000175513 77 ntBASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Gm5867-201ENSMUST00000063197 592 ntBASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.29■□□□□ 0.68
Stag1Q9D3E6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Gm25406-201ENSMUST00000157599 105 ntBASIC19.28■□□□□ 0.68
Stag1Q9D3E6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Gm9172-201ENSMUST00000212092 954 ntBASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stag1Q9D3E6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Gm8097-201ENSMUST00000117903 829 ntBASIC19.27■□□□□ 0.68
Stag1Q9D3E6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stag1Q9D3E6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Stag1Q9D3E6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Stag1Q9D3E6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Stag1Q9D3E6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Gm8655-201ENSMUST00000221159 852 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms