Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sft2d3Q9CSV6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Gm11950-201ENSMUST00000121615 838 ntBASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Gm6623-201ENSMUST00000173570 544 ntBASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Gm27000-201ENSMUST00000182943 842 ntBASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sft2d3Q9CSV6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sft2d3Q9CSV6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sft2d3Q9CSV6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sft2d3Q9CSV6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sft2d3Q9CSV6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sft2d3Q9CSV6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Mir770-201ENSMUST00000103252 94 ntBASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Gm9103-201ENSMUST00000119371 405 ntBASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Ank2-226ENSMUST00000189368 339 ntBASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sft2d3Q9CSV6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms