Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Gm5864-201ENSMUST00000202263 970 ntBASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lsm7Q9CQQ8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm7Q9CQQ8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Mzt1-203ENSMUST00000227948 952 ntBASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm7Q9CQQ8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm7Q9CQQ8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Gm13884-201ENSMUST00000118103 829 ntBASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms