Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh15Q99PJ1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh15Q99PJ1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm22065-201ENSMUST00000103753 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm22066-201ENSMUST00000103761 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm24932-201ENSMUST00000103763 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm24115-201ENSMUST00000103799 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm22190-201ENSMUST00000103827 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm22191-201ENSMUST00000103831 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm24721-201ENSMUST00000103849 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm28018-201ENSMUST00000103869 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm26399-201ENSMUST00000103937 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm25349-201ENSMUST00000177728 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm23616-201ENSMUST00000177797 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm25871-201ENSMUST00000177816 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm24752-201ENSMUST00000178240 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm24496-201ENSMUST00000178287 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm25649-201ENSMUST00000178476 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm25548-201ENSMUST00000178681 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm23147-201ENSMUST00000178841 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm26095-201ENSMUST00000179270 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm22171-201ENSMUST00000179283 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm23936-201ENSMUST00000179354 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm22619-201ENSMUST00000179516 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm25255-201ENSMUST00000179579 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm24755-201ENSMUST00000179691 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm26506-201ENSMUST00000179692 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm25086-201ENSMUST00000179931 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm23243-201ENSMUST00000180047 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm24659-201ENSMUST00000180212 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm24169-201ENSMUST00000180244 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm23689-201ENSMUST00000180354 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm27359-201ENSMUST00000184153 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm27785-201ENSMUST00000184268 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm27466-201ENSMUST00000184396 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm27703-201ENSMUST00000184836 110 ntBASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh15Q99PJ1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Gm18889-201ENSMUST00000174284 929 ntBASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh15Q99PJ1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdh15Q99PJ1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms