Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Gm11745-201ENSMUST00000121669 448 ntBASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Rarb-207ENSMUST00000225921 2756 ntBASIC16.47■□□□□ 0.23
Cdh23Q99PF4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Rprl2-201ENSMUST00000157150 290 ntBASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdh23Q99PF4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cdh23Q99PF4 Gm37153-201ENSMUST00000193637 231 ntBASIC16.46■□□□□ 0.22
Cdh23Q99PF4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cdh23Q99PF4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cdh23Q99PF4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cdh23Q99PF4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.45■□□□□ 0.22
Cdh23Q99PF4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cdh23Q99PF4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.44■□□□□ 0.22
Cdh23Q99PF4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms