Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cstf1Q99LC2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cstf1Q99LC2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Gm14057-201ENSMUST00000120631 482 ntBASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cstf1Q99LC2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cstf1Q99LC2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cstf1Q99LC2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Gm8097-201ENSMUST00000117903 829 ntBASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms