Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Gm43575-201ENSMUST00000196420 516 ntBASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcd2Q99JR8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcd2Q99JR8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Gm18622-201ENSMUST00000219361 595 ntBASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd2Q99JR8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Gm24513-201ENSMUST00000174964 138 ntBASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Gm27397-201ENSMUST00000184997 107 ntBASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smarcd2Q99JR8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms