Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Gm27397-201ENSMUST00000184997 107 ntBASIC18.69■□□□□ 0.58
Rfc4Q99J62 Gm9172-201ENSMUST00000212092 954 ntBASIC18.69■□□□□ 0.58
Rfc4Q99J62 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.68■□□□□ 0.58
Rfc4Q99J62 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Gm23935-201ENSMUST00000102303 57 ntBASIC18.68■□□□□ 0.58
Rfc4Q99J62 Gm24270-201ENSMUST00000102326 57 ntBASIC18.68■□□□□ 0.58
Rfc4Q99J62 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Gm24245-201ENSMUST00000157318 57 ntBASIC18.68■□□□□ 0.58
Rfc4Q99J62 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfc4Q99J62 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfc4Q99J62 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.68■□□□□ 0.58
Rfc4Q99J62 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Gm7222-201ENSMUST00000117512 906 ntBASIC18.67■□□□□ 0.58
Rfc4Q99J62 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.67■□□□□ 0.58
Rfc4Q99J62 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.67■□□□□ 0.58
Rfc4Q99J62 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.67■□□□□ 0.58
Rfc4Q99J62 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.67■□□□□ 0.58
Rfc4Q99J62 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc4Q99J62 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.66■□□□□ 0.58
Rfc4Q99J62 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.66■□□□□ 0.58
Rfc4Q99J62 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.66■□□□□ 0.58
Rfc4Q99J62 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.66■□□□□ 0.58
Rfc4Q99J62 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.66■□□□□ 0.58
Rfc4Q99J62 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc4Q99J62 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc4Q99J62 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms