Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdha11Q91Y19 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Gm27741-201ENSMUST00000185060 237 ntBASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha11Q91Y19 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Gm7153-201ENSMUST00000117092 455 ntBASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Gm15372-201ENSMUST00000120729 834 ntBASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Gm44454-201ENSMUST00000198541 138 ntBASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha11Q91Y19 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdha11Q91Y19 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha11Q91Y19 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha11Q91Y19 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha11Q91Y19 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.02■□□□□ 0.32
Pcdha11Q91Y19 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.02■□□□□ 0.32
Pcdha11Q91Y19 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdha11Q91Y19 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha11Q91Y19 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms