Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 AC159205.3-201ENSMUST00000224614 874 ntBASIC17■□□□□ 0.31
Pcdha3Q91Y16 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17■□□□□ 0.31
Pcdha3Q91Y16 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdha3Q91Y16 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Gm27704-201ENSMUST00000185094 107 ntBASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha3Q91Y16 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdha3Q91Y16 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha3Q91Y16 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms