Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb22Q91XZ8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Mir3081-201ENSMUST00000175305 84 ntBASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Gm21362-201ENSMUST00000194272 928 ntBASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Gm7367-201ENSMUST00000057611 492 ntBASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb22Q91XZ8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb22Q91XZ8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Rprl3-201ENSMUST00000157400 290 ntBASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb22Q91XZ8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdhb22Q91XZ8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms