Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.58■□□□□ 0.56
Trex1Q91XB0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trex1Q91XB0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Trex1Q91XB0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.57■□□□□ 0.56
Trex1Q91XB0 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.57■□□□□ 0.56
Trex1Q91XB0 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.57■□□□□ 0.56
Trex1Q91XB0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.57■□□□□ 0.56
Trex1Q91XB0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trex1Q91XB0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Gm13036-201ENSMUST00000117799 748 ntBASIC18.56■□□□□ 0.56
Trex1Q91XB0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.56■□□□□ 0.56
Trex1Q91XB0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trex1Q91XB0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.55■□□□□ 0.56
Trex1Q91XB0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Gm27628-201ENSMUST00000184911 107 ntBASIC18.55■□□□□ 0.56
Trex1Q91XB0 Gm5264-201ENSMUST00000190584 848 ntBASIC18.55■□□□□ 0.56
Trex1Q91XB0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trex1Q91XB0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.54■□□□□ 0.56
Trex1Q91XB0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trex1Q91XB0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trex1Q91XB0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trex1Q91XB0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Trex1Q91XB0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trex1Q91XB0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trex1Q91XB0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trex1Q91XB0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trex1Q91XB0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trex1Q91XB0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms