Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Gm24589-201ENSMUST00000116692 94 ntBASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Gm34391-201ENSMUST00000203706 907 ntBASIC18.61■□□□□ 0.57
Ddx41Q91VN6 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx41Q91VN6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.6■□□□□ 0.57
Ddx41Q91VN6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Gm7461-201ENSMUST00000058918 827 ntBASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Ddx41Q91VN6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.59■□□□□ 0.57
Ddx41Q91VN6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx41Q91VN6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx41Q91VN6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx41Q91VN6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx41Q91VN6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Birc2-201ENSMUST00000054878 378 ntBASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx41Q91VN6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx41Q91VN6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms