Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Gm12085-201ENSMUST00000119263 940 ntBASIC13.28□□□□□ -0.28
Nup35Q8R4R6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Gm10602-201ENSMUST00000098239 609 ntBASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup35Q8R4R6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup35Q8R4R6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Gm38027-201ENSMUST00000192315 235 ntBASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup35Q8R4R6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup35Q8R4R6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms