Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nudcd3Q8R1N4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Gm15378-201ENSMUST00000121894 207 ntBASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Gm38027-201ENSMUST00000192315 235 ntBASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nudcd3Q8R1N4 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.27■□□□□ 0.19
Nudcd3Q8R1N4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nudcd3Q8R1N4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nudcd3Q8R1N4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nudcd3Q8R1N4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nudcd3Q8R1N4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nudcd3Q8R1N4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nudcd3Q8R1N4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nudcd3Q8R1N4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Trmt13-210ENSMUST00000198454 880 ntBASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms