Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Gm13884-201ENSMUST00000118103 829 ntBASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rbm28Q8CGC6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Gm12644-201ENSMUST00000119935 606 ntBASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbm28Q8CGC6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Rbm28Q8CGC6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Rbm28Q8CGC6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbm28Q8CGC6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm28Q8CGC6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbm28Q8CGC6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbm28Q8CGC6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbm28Q8CGC6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rbm28Q8CGC6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbm28Q8CGC6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rbm28Q8CGC6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbm28Q8CGC6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Rbm28Q8CGC6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms