Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Gm27357-201ENSMUST00000183754 135 ntBASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp44Q8C2S0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp44Q8C2S0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Usp44Q8C2S0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp44Q8C2S0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp44Q8C2S0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp44Q8C2S0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp44Q8C2S0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp44Q8C2S0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp44Q8C2S0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp44Q8C2S0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Usp44Q8C2S0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19■□□□□ 0.63
Usp44Q8C2S0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Usp44Q8C2S0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Usp44Q8C2S0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Gm19430-201ENSMUST00000193847 2137 ntBASIC19■□□□□ 0.63
Usp44Q8C2S0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Usp44Q8C2S0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp44Q8C2S0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp44Q8C2S0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp44Q8C2S0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms