Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptcd1Q8C2E4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Gm13036-201ENSMUST00000117799 748 ntBASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ptcd1Q8C2E4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptcd1Q8C2E4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptcd1Q8C2E4 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptcd1Q8C2E4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms