Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smim4Q8C1Q6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smim4Q8C1Q6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smim4Q8C1Q6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smim4Q8C1Q6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Phf7-203ENSMUST00000226565 1971 ntBASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Gm2274-201ENSMUST00000184539 609 ntBASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim4Q8C1Q6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Gm16061-201ENSMUST00000122167 857 ntBASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim4Q8C1Q6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Gm5417-201ENSMUST00000079706 384 ntBASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim4Q8C1Q6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim4Q8C1Q6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim4Q8C1Q6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim4Q8C1Q6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms