Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.74□□□□□ -0.37
Chd9Q8BYH8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm12497-201ENSMUST00000138778 237 ntBASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm27430-201ENSMUST00000184585 107 ntBASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm29707-201ENSMUST00000196325 491 ntBASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm44333-201ENSMUST00000197168 107 ntBASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Gm3786-201ENSMUST00000202659 378 ntBASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd9Q8BYH8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd9Q8BYH8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd9Q8BYH8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd9Q8BYH8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms