Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Gm13216-201ENSMUST00000117145 591 ntBASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Gm11780-201ENSMUST00000136880 516 ntBASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scfd1Q8BRF7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Scfd1Q8BRF7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scfd1Q8BRF7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scfd1Q8BRF7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scfd1Q8BRF7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Gm12350-201ENSMUST00000121208 462 ntBASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scfd1Q8BRF7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Gm6089-201ENSMUST00000197666 938 ntBASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scfd1Q8BRF7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Gm18206-201ENSMUST00000207027 926 ntBASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scfd1Q8BRF7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Mir5126-201ENSMUST00000175513 77 ntBASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scfd1Q8BRF7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms