Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdhr3Q8BL00 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Gm27463-201ENSMUST00000183569 57 ntBASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdhr3Q8BL00 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Gm11539-201ENSMUST00000119837 557 ntBASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Gm44450-201ENSMUST00000199528 114 ntBASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdhr3Q8BL00 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdhr3Q8BL00 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdhr3Q8BL00 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms