Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Gm13036-201ENSMUST00000117799 748 ntBASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcal1Q8BJL0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Gm11594-201ENSMUST00000122313 162 ntBASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Gm2756-201ENSMUST00000195851 400 ntBASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcal1Q8BJL0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smarcal1Q8BJL0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Gm9727-201ENSMUST00000161387 555 ntBASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcal1Q8BJL0 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms