Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2bQ8BJF9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2bQ8BJF9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
Chmp2bQ8BJF9 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Mir5122-201ENSMUST00000175004 89 ntBASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Gm21814-202ENSMUST00000203277 873 ntBASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2bQ8BJF9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2bQ8BJF9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chmp2bQ8BJF9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms