Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Gm7889-201ENSMUST00000185591 958 ntBASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Gm7213-201ENSMUST00000215977 950 ntBASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Prob1-201ENSMUST00000097619 3021 ntBASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Actl10-202ENSMUST00000226583 1501 ntBASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Mir1668-201ENSMUST00000184114 107 ntBASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Gm45058-201ENSMUST00000205810 766 ntBASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Gm18959-201ENSMUST00000208954 655 ntBASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc40Q8BI79 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Gm15565-201ENSMUST00000118890 427 ntBASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Mir5130-201ENSMUST00000175160 84 ntBASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Mir6982-201ENSMUST00000184354 68 ntBASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc40Q8BI79 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc40Q8BI79 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms