Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf38Q8BI21 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf38Q8BI21 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf38Q8BI21 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf38Q8BI21 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf38Q8BI21 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf38Q8BI21 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Gm5417-201ENSMUST00000079706 384 ntBASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf38Q8BI21 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Gm44450-201ENSMUST00000199528 114 ntBASIC15.69■□□□□ 0.1
Rnf38Q8BI21 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf38Q8BI21 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Gm11539-201ENSMUST00000119837 557 ntBASIC15.68■□□□□ 0.1
Rnf38Q8BI21 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Gm10566-201ENSMUST00000086739 996 ntBASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf38Q8BI21 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf38Q8BI21 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms