Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Gm4995-201ENSMUST00000117247 432 ntBASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Gm43575-201ENSMUST00000196420 516 ntBASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp6nlQ80XC3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp6nlQ80XC3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp6nlQ80XC3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Usp6nlQ80XC3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Gm7222-201ENSMUST00000117512 906 ntBASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Gm6736-201ENSMUST00000166583 948 ntBASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Gm2756-201ENSMUST00000195851 400 ntBASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp6nlQ80XC3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp6nlQ80XC3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp6nlQ80XC3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms