Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm13312-201ENSMUST00000119631 718 ntBASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Gm15372-201ENSMUST00000120729 834 ntBASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Gm44771-201ENSMUST00000206975 626 ntBASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pcdh8Q7TSK3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh8Q7TSK3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh8Q7TSK3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh8Q7TSK3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Pcdh8Q7TSK3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pcdh8Q7TSK3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Gm12644-201ENSMUST00000119935 606 ntBASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh8Q7TSK3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh8Q7TSK3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Gm11452-201ENSMUST00000122376 690 ntBASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh8Q7TSK3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Gm13884-201ENSMUST00000118103 829 ntBASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh8Q7TSK3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms