Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sned1Q70E20 Gm11424-201ENSMUST00000121929 829 ntBASIC19.56■□□□□ 0.72
Sned1Q70E20 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.56■□□□□ 0.72
Sned1Q70E20 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sned1Q70E20 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Sned1Q70E20 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Gm27437-201ENSMUST00000183429 107 ntBASIC19.55■□□□□ 0.72
Sned1Q70E20 Mir6977-201ENSMUST00000184960 64 ntBASIC19.55■□□□□ 0.72
Sned1Q70E20 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.55■□□□□ 0.72
Sned1Q70E20 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.55■□□□□ 0.72
Sned1Q70E20 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.55■□□□□ 0.72
Sned1Q70E20 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sned1Q70E20 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Sned1Q70E20 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Sned1Q70E20 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sned1Q70E20 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sned1Q70E20 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sned1Q70E20 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sned1Q70E20 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sned1Q70E20 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.54■□□□□ 0.72
Sned1Q70E20 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sned1Q70E20 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sned1Q70E20 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sned1Q70E20 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.53■□□□□ 0.72
Sned1Q70E20 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Sned1Q70E20 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sned1Q70E20 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sned1Q70E20 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Sned1Q70E20 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sned1Q70E20 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sned1Q70E20 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.52■□□□□ 0.72
Sned1Q70E20 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.52■□□□□ 0.72
Sned1Q70E20 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.52■□□□□ 0.72
Sned1Q70E20 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.52■□□□□ 0.72
Sned1Q70E20 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sned1Q70E20 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sned1Q70E20 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sned1Q70E20 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sned1Q70E20 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sned1Q70E20 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sned1Q70E20 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sned1Q70E20 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sned1Q70E20 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sned1Q70E20 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sned1Q70E20 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.51■□□□□ 0.71
Sned1Q70E20 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.51■□□□□ 0.71
Sned1Q70E20 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sned1Q70E20 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Sned1Q70E20 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.51■□□□□ 0.71
Sned1Q70E20 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sned1Q70E20 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms