Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Gm27704-201ENSMUST00000185094 107 ntBASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc2Q6PDG5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc2Q6PDG5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc2Q6PDG5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.93■□□□□ 0.62
Smarcc2Q6PDG5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms