Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Gm12895-201ENSMUST00000122214 226 ntBASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Gm12497-201ENSMUST00000138778 237 ntBASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp200Q6P4T2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Gm43347-201ENSMUST00000200226 580 ntBASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp200Q6P4T2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Snrnp200Q6P4T2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Gm4459-201ENSMUST00000118750 468 ntBASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp200Q6P4T2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snrnp200Q6P4T2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.28■□□□□ 0.04
Snrnp200Q6P4T2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms