Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt40Q6IFX3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Gm6443-201ENSMUST00000203599 874 ntBASIC19.05■□□□□ 0.64
Krt40Q6IFX3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt40Q6IFX3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Mir5131-201ENSMUST00000175426 93 ntBASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt40Q6IFX3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Gm7230-201ENSMUST00000173026 815 ntBASIC19.03■□□□□ 0.64
Krt40Q6IFX3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.03■□□□□ 0.64
Krt40Q6IFX3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 AW822252-206ENSMUST00000208904 237 ntBASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt40Q6IFX3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.02■□□□□ 0.63
Krt40Q6IFX3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Krt40Q6IFX3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.02■□□□□ 0.63
Krt40Q6IFX3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Krt40Q6IFX3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.01■□□□□ 0.63
Krt40Q6IFX3 Gm6089-201ENSMUST00000197666 938 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms