Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.41□□□□□ -0.26
Col7a1Q63870 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.41□□□□□ -0.26
Col7a1Q63870 Gm9682-201ENSMUST00000197505 556 ntBASIC13.41□□□□□ -0.26
Col7a1Q63870 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.41□□□□□ -0.26
Col7a1Q63870 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.41□□□□□ -0.26
Col7a1Q63870 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.41□□□□□ -0.26
Col7a1Q63870 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.41□□□□□ -0.26
Col7a1Q63870 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.41□□□□□ -0.26
Col7a1Q63870 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.41□□□□□ -0.26
Col7a1Q63870 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.41□□□□□ -0.26
Col7a1Q63870 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col7a1Q63870 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.41□□□□□ -0.26
Col7a1Q63870 Gm17150-201ENSMUST00000165577 381 ntBASIC13.4□□□□□ -0.26
Col7a1Q63870 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col7a1Q63870 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Gm15358-201ENSMUST00000119249 520 ntBASIC13.4□□□□□ -0.26
Col7a1Q63870 Gm24694-201ENSMUST00000180054 110 ntBASIC13.4□□□□□ -0.26
Col7a1Q63870 Gm27663-201ENSMUST00000184839 110 ntBASIC13.4□□□□□ -0.26
Col7a1Q63870 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.4□□□□□ -0.26
Col7a1Q63870 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col7a1Q63870 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col7a1Q63870 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
Col7a1Q63870 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col7a1Q63870 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Col7a1Q63870 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Gm6745-201ENSMUST00000199216 526 ntBASIC13.39□□□□□ -0.27
Col7a1Q63870 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.39□□□□□ -0.27
Col7a1Q63870 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.39□□□□□ -0.27
Col7a1Q63870 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col7a1Q63870 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.39□□□□□ -0.27
Col7a1Q63870 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col7a1Q63870 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Col7a1Q63870 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.38□□□□□ -0.27
Col7a1Q63870 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Col7a1Q63870 Gm45384-201ENSMUST00000210451 277 ntBASIC13.38□□□□□ -0.27
Col7a1Q63870 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.38□□□□□ -0.27
Col7a1Q63870 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col7a1Q63870 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.38□□□□□ -0.27
Col7a1Q63870 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Gm8344-201ENSMUST00000119813 856 ntBASIC13.38□□□□□ -0.27
Col7a1Q63870 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col7a1Q63870 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col7a1Q63870 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col7a1Q63870 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.37□□□□□ -0.27
Col7a1Q63870 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col7a1Q63870 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col7a1Q63870 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.37□□□□□ -0.27
Col7a1Q63870 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms