Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AtmQ62388 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AtmQ62388 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
AtmQ62388 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AtmQ62388 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
AtmQ62388 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.27■□□□□ 0.03
AtmQ62388 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
AtmQ62388 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.26■□□□□ 0.03
AtmQ62388 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 Gm45612-201ENSMUST00000211320 160 ntBASIC15.26■□□□□ 0.03
AtmQ62388 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.26■□□□□ 0.03
AtmQ62388 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.26■□□□□ 0.03
AtmQ62388 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.26■□□□□ 0.03
AtmQ62388 Gm13223-201ENSMUST00000118609 747 ntBASIC15.26■□□□□ 0.03
AtmQ62388 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.26■□□□□ 0.03
AtmQ62388 Gm9172-201ENSMUST00000212092 954 ntBASIC15.26■□□□□ 0.03
AtmQ62388 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
AtmQ62388 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AtmQ62388 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.25■□□□□ 0.03
AtmQ62388 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.25■□□□□ 0.03
AtmQ62388 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.25■□□□□ 0.03
AtmQ62388 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AtmQ62388 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.25■□□□□ 0.03
AtmQ62388 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AtmQ62388 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.25■□□□□ 0.03
AtmQ62388 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.25■□□□□ 0.03
AtmQ62388 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
AtmQ62388 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
AtmQ62388 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.25■□□□□ 0.03
AtmQ62388 Gm45747-201ENSMUST00000212203 999 ntBASIC15.25■□□□□ 0.03
AtmQ62388 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AtmQ62388 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AtmQ62388 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.24■□□□□ 0.03
AtmQ62388 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Gm27301-201ENSMUST00000184012 127 ntBASIC15.24■□□□□ 0.03
AtmQ62388 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.24■□□□□ 0.03
AtmQ62388 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.24■□□□□ 0.03
AtmQ62388 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.24■□□□□ 0.03
AtmQ62388 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Mir449b-201ENSMUST00000104833 80 ntBASIC15.24■□□□□ 0.03
AtmQ62388 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.24■□□□□ 0.03
AtmQ62388 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AtmQ62388 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.24■□□□□ 0.03
AtmQ62388 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AtmQ62388 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.24■□□□□ 0.03
AtmQ62388 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
AtmQ62388 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.23■□□□□ 0.03
AtmQ62388 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AtmQ62388 Gm27437-201ENSMUST00000183429 107 ntBASIC15.23■□□□□ 0.03
AtmQ62388 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AtmQ62388 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AtmQ62388 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AtmQ62388 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AtmQ62388 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AtmQ62388 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
AtmQ62388 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AtmQ62388 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AtmQ62388 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AtmQ62388 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.23■□□□□ 0.03
AtmQ62388 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AtmQ62388 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.23■□□□□ 0.03
AtmQ62388 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms