Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six2Q62232 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six2Q62232 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six2Q62232 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Six2Q62232 Gm9013-201ENSMUST00000132939 882 ntBASIC17.33■□□□□ 0.36
Six2Q62232 Gm44430-201ENSMUST00000203376 995 ntBASIC17.33■□□□□ 0.36
Six2Q62232 Gm5587-201ENSMUST00000206270 674 ntBASIC17.33■□□□□ 0.36
Six2Q62232 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.33■□□□□ 0.36
Six2Q62232 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Six2Q62232 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six2Q62232 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.33■□□□□ 0.36
Six2Q62232 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six2Q62232 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six2Q62232 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.33■□□□□ 0.36
Six2Q62232 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Six2Q62232 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.32■□□□□ 0.36
Six2Q62232 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.32■□□□□ 0.36
Six2Q62232 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.32■□□□□ 0.36
Six2Q62232 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Six2Q62232 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six2Q62232 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.31■□□□□ 0.36
Six2Q62232 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Six2Q62232 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.31■□□□□ 0.36
Six2Q62232 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Six2Q62232 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Gm10052-201ENSMUST00000168019 960 ntBASIC17.31■□□□□ 0.36
Six2Q62232 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.31■□□□□ 0.36
Six2Q62232 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.31■□□□□ 0.36
Six2Q62232 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.31■□□□□ 0.36
Six2Q62232 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Gm7729-201ENSMUST00000050143 801 ntBASIC17.31■□□□□ 0.36
Six2Q62232 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.31■□□□□ 0.36
Six2Q62232 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.31■□□□□ 0.36
Six2Q62232 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six2Q62232 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.3■□□□□ 0.36
Six2Q62232 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Six2Q62232 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Six2Q62232 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.3■□□□□ 0.36
Six2Q62232 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Six2Q62232 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Six2Q62232 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Six2Q62232 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six2Q62232 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Six2Q62232 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.3■□□□□ 0.36
Six2Q62232 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.29■□□□□ 0.36
Six2Q62232 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Six2Q62232 Gm6623-201ENSMUST00000173570 544 ntBASIC17.29■□□□□ 0.36
Six2Q62232 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six2Q62232 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms