Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.68■□□□□ 0.26
Six1Q62231 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.68■□□□□ 0.26
Six1Q62231 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.67■□□□□ 0.26
Six1Q62231 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Six1Q62231 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Six1Q62231 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Six1Q62231 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.67■□□□□ 0.26
Six1Q62231 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.67■□□□□ 0.26
Six1Q62231 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Six1Q62231 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six1Q62231 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.66■□□□□ 0.26
Six1Q62231 Asic1-205ENSMUST00000228185 1818 ntBASIC16.66■□□□□ 0.26
Six1Q62231 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Six1Q62231 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Six1Q62231 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Six1Q62231 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Six1Q62231 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.66■□□□□ 0.26
Six1Q62231 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Six1Q62231 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six1Q62231 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.65■□□□□ 0.26
Six1Q62231 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Six1Q62231 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.65■□□□□ 0.26
Six1Q62231 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.65■□□□□ 0.26
Six1Q62231 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.65■□□□□ 0.26
Six1Q62231 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Six1Q62231 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six1Q62231 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Six1Q62231 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six1Q62231 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.64■□□□□ 0.25
Six1Q62231 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six1Q62231 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.64■□□□□ 0.25
Six1Q62231 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six1Q62231 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six1Q62231 Gm7889-201ENSMUST00000185591 958 ntBASIC16.64■□□□□ 0.25
Six1Q62231 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six1Q62231 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.64■□□□□ 0.25
Six1Q62231 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Six1Q62231 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six1Q62231 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six1Q62231 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six1Q62231 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Six1Q62231 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.63■□□□□ 0.25
Six1Q62231 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.63■□□□□ 0.25
Six1Q62231 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.63■□□□□ 0.25
Six1Q62231 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Six1Q62231 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.63■□□□□ 0.25
Six1Q62231 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Six1Q62231 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Gm45058-201ENSMUST00000205810 766 ntBASIC16.63■□□□□ 0.25
Six1Q62231 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.63■□□□□ 0.25
Six1Q62231 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Six1Q62231 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.63■□□□□ 0.25
Six1Q62231 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Six1Q62231 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six1Q62231 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms