Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ctr9Q62018 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Ctr9Q62018 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.1■□□□□ 0.65
Ctr9Q62018 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.1■□□□□ 0.65
Ctr9Q62018 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Gm13216-201ENSMUST00000117145 591 ntBASIC19.1■□□□□ 0.65
Ctr9Q62018 Gm15165-201ENSMUST00000118140 502 ntBASIC19.1■□□□□ 0.65
Ctr9Q62018 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.1■□□□□ 0.65
Ctr9Q62018 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.1■□□□□ 0.65
Ctr9Q62018 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctr9Q62018 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Ctr9Q62018 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.09■□□□□ 0.65
Ctr9Q62018 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.09■□□□□ 0.65
Ctr9Q62018 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.09■□□□□ 0.65
Ctr9Q62018 Gm43347-201ENSMUST00000200226 580 ntBASIC19.09■□□□□ 0.65
Ctr9Q62018 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.09■□□□□ 0.65
Ctr9Q62018 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ctr9Q62018 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctr9Q62018 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.08■□□□□ 0.65
Ctr9Q62018 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ctr9Q62018 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.08■□□□□ 0.65
Ctr9Q62018 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ctr9Q62018 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Ctr9Q62018 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Ctr9Q62018 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ctr9Q62018 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ctr9Q62018 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ctr9Q62018 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ctr9Q62018 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ctr9Q62018 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ctr9Q62018 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.08■□□□□ 0.64
Ctr9Q62018 Gm12644-201ENSMUST00000119935 606 ntBASIC19.08■□□□□ 0.64
Ctr9Q62018 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.08■□□□□ 0.64
Ctr9Q62018 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.08■□□□□ 0.64
Ctr9Q62018 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ctr9Q62018 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ctr9Q62018 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ctr9Q62018 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ctr9Q62018 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ctr9Q62018 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ctr9Q62018 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.08■□□□□ 0.64
Ctr9Q62018 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ctr9Q62018 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ctr9Q62018 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ctr9Q62018 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ctr9Q62018 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Ctr9Q62018 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ctr9Q62018 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ctr9Q62018 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ctr9Q62018 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.06■□□□□ 0.64
Ctr9Q62018 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms