Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gli3Q61602 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.92■■□□□ 1.1
Gli3Q61602 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC21.92■■□□□ 1.1
Gli3Q61602 Gm15358-201ENSMUST00000119249 520 ntBASIC21.92■■□□□ 1.1
Gli3Q61602 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Gli3Q61602 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC21.92■■□□□ 1.1
Gli3Q61602 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Gli3Q61602 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.92■■□□□ 1.1
Gli3Q61602 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gli3Q61602 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gli3Q61602 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gli3Q61602 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gli3Q61602 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC21.91■■□□□ 1.1
Gli3Q61602 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Gli3Q61602 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gli3Q61602 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gli3Q61602 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gli3Q61602 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gli3Q61602 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC21.91■■□□□ 1.1
Gli3Q61602 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gli3Q61602 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC21.91■■□□□ 1.1
Gli3Q61602 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gli3Q61602 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gli3Q61602 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gli3Q61602 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC21.9■■□□□ 1.1
Gli3Q61602 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC21.9■■□□□ 1.1
Gli3Q61602 AC135669.1-201ENSMUST00000213585 412 ntBASIC21.9■■□□□ 1.1
Gli3Q61602 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gli3Q61602 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Gli3Q61602 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gli3Q61602 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gli3Q61602 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gli3Q61602 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.89■■□□□ 1.1
Gli3Q61602 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.89■■□□□ 1.09
Gli3Q61602 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC21.89■■□□□ 1.09
Gli3Q61602 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Mir7085-201ENSMUST00000184353 66 ntBASIC21.89■■□□□ 1.09
Gli3Q61602 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC21.89■■□□□ 1.09
Gli3Q61602 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.89■■□□□ 1.09
Gli3Q61602 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gli3Q61602 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Gli3Q61602 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gli3Q61602 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gli3Q61602 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC21.88■■□□□ 1.09
Gli3Q61602 Gm44855-201ENSMUST00000205725 362 ntBASIC21.88■■□□□ 1.09
Gli3Q61602 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC21.88■■□□□ 1.09
Gli3Q61602 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.88■■□□□ 1.09
Gli3Q61602 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gli3Q61602 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gli3Q61602 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Gli3Q61602 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gli3Q61602 Gm9899-201ENSMUST00000065519 555 ntBASIC21.88■■□□□ 1.09
Gli3Q61602 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Gli3Q61602 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gli3Q61602 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gli3Q61602 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Gm6912-201ENSMUST00000117218 544 ntBASIC21.87■■□□□ 1.09
Gli3Q61602 Gm9385-201ENSMUST00000117563 472 ntBASIC21.87■■□□□ 1.09
Gli3Q61602 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC21.87■■□□□ 1.09
Gli3Q61602 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC21.87■■□□□ 1.09
Gli3Q61602 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Gli3Q61602 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Gm11453-201ENSMUST00000117318 1007 ntBASIC21.87■■□□□ 1.09
Gli3Q61602 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gli3Q61602 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gli3Q61602 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gli3Q61602 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gli3Q61602 Gm14719-201ENSMUST00000121891 340 ntBASIC21.86■■□□□ 1.09
Gli3Q61602 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gli3Q61602 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.86■■□□□ 1.09
Gli3Q61602 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gli3Q61602 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gli3Q61602 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gli3Q61602 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms