Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.64■□□□□ 0.57
Scnn1aQ61180 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scnn1aQ61180 Gm6089-201ENSMUST00000197666 938 ntBASIC18.64■□□□□ 0.57
Scnn1aQ61180 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.64■□□□□ 0.57
Scnn1aQ61180 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scnn1aQ61180 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scnn1aQ61180 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scnn1aQ61180 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scnn1aQ61180 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.63■□□□□ 0.57
Scnn1aQ61180 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Gm15173-201ENSMUST00000122049 433 ntBASIC18.63■□□□□ 0.57
Scnn1aQ61180 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Scnn1aQ61180 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scnn1aQ61180 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scnn1aQ61180 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.61■□□□□ 0.57
Scnn1aQ61180 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Gm18206-201ENSMUST00000207027 926 ntBASIC18.61■□□□□ 0.57
Scnn1aQ61180 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scnn1aQ61180 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.6■□□□□ 0.57
Scnn1aQ61180 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.59■□□□□ 0.57
Scnn1aQ61180 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.59■□□□□ 0.57
Scnn1aQ61180 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Gm1401-201ENSMUST00000122048 772 ntBASIC18.59■□□□□ 0.57
Scnn1aQ61180 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.59■□□□□ 0.57
Scnn1aQ61180 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.59■□□□□ 0.57
Scnn1aQ61180 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Gm18622-201ENSMUST00000219361 595 ntBASIC18.59■□□□□ 0.57
Scnn1aQ61180 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scnn1aQ61180 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms