Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 CT025626.1-201ENSMUST00000223735 1455 ntBASIC23.32■■□□□ 1.32
Ptch1Q61115 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC23.32■■□□□ 1.32
Ptch1Q61115 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC23.32■■□□□ 1.32
Ptch1Q61115 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC23.32■■□□□ 1.32
Ptch1Q61115 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC23.32■■□□□ 1.32
Ptch1Q61115 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC23.32■■□□□ 1.32
Ptch1Q61115 AC154767.3-201ENSMUST00000225150 1342 ntBASIC23.32■■□□□ 1.32
Ptch1Q61115 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Ptch1Q61115 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC23.31■■□□□ 1.32
Ptch1Q61115 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC23.31■■□□□ 1.32
Ptch1Q61115 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC23.31■■□□□ 1.32
Ptch1Q61115 Rprl2-201ENSMUST00000157150 290 ntBASIC23.31■■□□□ 1.32
Ptch1Q61115 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ptch1Q61115 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC23.31■■□□□ 1.32
Ptch1Q61115 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptch1Q61115 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ptch1Q61115 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptch1Q61115 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptch1Q61115 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptch1Q61115 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Ptch1Q61115 Gm11424-201ENSMUST00000121929 829 ntBASIC23.3■■□□□ 1.32
Ptch1Q61115 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ptch1Q61115 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ptch1Q61115 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Ptch1Q61115 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC23.3■■□□□ 1.32
Ptch1Q61115 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC23.3■■□□□ 1.32
Ptch1Q61115 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC23.3■■□□□ 1.32
Ptch1Q61115 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptch1Q61115 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptch1Q61115 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptch1Q61115 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC23.29■■□□□ 1.32
Ptch1Q61115 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptch1Q61115 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Ptch1Q61115 Zcchc6-207ENSMUST00000225576 2499 ntBASIC23.29■■□□□ 1.32
Ptch1Q61115 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptch1Q61115 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC23.29■■□□□ 1.32
Ptch1Q61115 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC23.29■■□□□ 1.32
Ptch1Q61115 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ptch1Q61115 Rpph1-201ENSMUST00000175096 319 ntBASIC23.29■■□□□ 1.32
Ptch1Q61115 Hist1h2al-201ENSMUST00000091708 339 ntBASIC23.29■■□□□ 1.32
Ptch1Q61115 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ptch1Q61115 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ptch1Q61115 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ptch1Q61115 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ptch1Q61115 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ptch1Q61115 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptch1Q61115 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ptch1Q61115 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptch1Q61115 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Ptch1Q61115 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC23.28■■□□□ 1.32
Ptch1Q61115 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC23.28■■□□□ 1.32
Ptch1Q61115 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ptch1Q61115 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ptch1Q61115 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptch1Q61115 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Ptch1Q61115 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Ptch1Q61115 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Ptch1Q61115 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC23.27■■□□□ 1.32
Ptch1Q61115 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC23.27■■□□□ 1.32
Ptch1Q61115 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Ptch1Q61115 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ptch1Q61115 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ptch1Q61115 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptch1Q61115 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Ptch1Q61115 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.31
Ptch1Q61115 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Ptch1Q61115 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptch1Q61115 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ptch1Q61115 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ptch1Q61115 Gm22065-201ENSMUST00000103753 110 ntBASIC23.26■■□□□ 1.31
Ptch1Q61115 Gm22066-201ENSMUST00000103761 110 ntBASIC23.26■■□□□ 1.31
Ptch1Q61115 Gm24932-201ENSMUST00000103763 110 ntBASIC23.26■■□□□ 1.31
Ptch1Q61115 Gm24115-201ENSMUST00000103799 110 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms