Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc27Q3V036 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc27Q3V036 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Gm27463-201ENSMUST00000183569 57 ntBASIC20.69■□□□□ 0.9
Ccdc27Q3V036 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc27Q3V036 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Gm10252-201ENSMUST00000209541 832 ntBASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc27Q3V036 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc27Q3V036 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms