Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf223Q3UV31 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf223Q3UV31 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Gm25406-201ENSMUST00000157599 105 ntBASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Gm6376-201ENSMUST00000209407 580 ntBASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf223Q3UV31 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf223Q3UV31 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf223Q3UV31 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf223Q3UV31 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf223Q3UV31 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Mir6404-201ENSMUST00000183699 94 ntBASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf223Q3UV31 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Gm44771-201ENSMUST00000206975 626 ntBASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf223Q3UV31 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms