Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.94□□□□□ -0.02
Spg11Q3UHA3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Gm13453-201ENSMUST00000118708 357 ntBASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Mir3102-201ENSMUST00000175555 104 ntBASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Thap2-203ENSMUST00000218989 527 ntBASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Spg11Q3UHA3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Gm13829-201ENSMUST00000119600 138 ntBASIC14.92□□□□□ -0.02
Spg11Q3UHA3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Gm18622-201ENSMUST00000219361 595 ntBASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Gm15487-201ENSMUST00000122373 465 ntBASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Spg11Q3UHA3 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.91□□□□□ -0.02
Spg11Q3UHA3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Mir7684-201ENSMUST00000183858 60 ntBASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Mir3547-201ENSMUST00000175461 88 ntBASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Spg11Q3UHA3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms