Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Cul4aQ3TCH7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cul4aQ3TCH7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Gm30025-201ENSMUST00000218555 728 ntBASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cul4aQ3TCH7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cul4aQ3TCH7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cul4aQ3TCH7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Gm13436-201ENSMUST00000120418 567 ntBASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cul4aQ3TCH7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cul4aQ3TCH7 Mir1668-201ENSMUST00000184114 107 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms