Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Gm7292-201ENSMUST00000194706 2527 ntBASIC11.92□□□□□ -0.5
Hspg2Q05793 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.91□□□□□ -0.5
Hspg2Q05793 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC11.91□□□□□ -0.5
Hspg2Q05793 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hspg2Q05793 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hspg2Q05793 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hspg2Q05793 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Hspg2Q05793 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hspg2Q05793 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hspg2Q05793 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.9□□□□□ -0.5
Hspg2Q05793 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.9□□□□□ -0.5
Hspg2Q05793 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Gm11424-201ENSMUST00000121929 829 ntBASIC11.9□□□□□ -0.5
Hspg2Q05793 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.9□□□□□ -0.5
Hspg2Q05793 Gm8825-201ENSMUST00000182565 998 ntBASIC11.9□□□□□ -0.5
Hspg2Q05793 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hspg2Q05793 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hspg2Q05793 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hspg2Q05793 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hspg2Q05793 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Hspg2Q05793 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hspg2Q05793 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.89□□□□□ -0.51
Hspg2Q05793 Gm45606-201ENSMUST00000209836 2795 ntBASIC11.89□□□□□ -0.51
Hspg2Q05793 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Gm27494-201ENSMUST00000184735 189 ntBASIC11.89□□□□□ -0.51
Hspg2Q05793 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Hspg2Q05793 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hspg2Q05793 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC11.89□□□□□ -0.51
Hspg2Q05793 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hspg2Q05793 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.89□□□□□ -0.51
Hspg2Q05793 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.89□□□□□ -0.51
Hspg2Q05793 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms