Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col8a1Q00780 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Col8a1Q00780 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col8a1Q00780 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.84□□□□□ -0.19
Col8a1Q00780 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col8a1Q00780 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col8a1Q00780 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.84□□□□□ -0.19
Col8a1Q00780 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col8a1Q00780 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col8a1Q00780 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.83□□□□□ -0.19
Col8a1Q00780 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.83□□□□□ -0.2
Col8a1Q00780 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Gm44430-201ENSMUST00000203376 995 ntBASIC13.83□□□□□ -0.2
Col8a1Q00780 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.83□□□□□ -0.2
Col8a1Q00780 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col8a1Q00780 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col8a1Q00780 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.82□□□□□ -0.2
Col8a1Q00780 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.82□□□□□ -0.2
Col8a1Q00780 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.82□□□□□ -0.2
Col8a1Q00780 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.82□□□□□ -0.2
Col8a1Q00780 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Col8a1Q00780 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.82□□□□□ -0.2
Col8a1Q00780 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Col8a1Q00780 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Chchd1-203ENSMUST00000224633 557 ntBASIC13.82□□□□□ -0.2
Col8a1Q00780 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col8a1Q00780 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.82□□□□□ -0.2
Col8a1Q00780 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a1Q00780 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a1Q00780 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a1Q00780 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a1Q00780 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a1Q00780 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a1Q00780 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a1Q00780 Gm14701-201ENSMUST00000117156 348 ntBASIC13.81□□□□□ -0.2
Col8a1Q00780 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a1Q00780 Gm27321-201ENSMUST00000185021 205 ntBASIC13.81□□□□□ -0.2
Col8a1Q00780 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a1Q00780 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.81□□□□□ -0.2
Col8a1Q00780 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a1Q00780 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a1Q00780 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col8a1Q00780 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a1Q00780 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a1Q00780 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a1Q00780 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col8a1Q00780 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms