Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.67□□□□□ -0.22
SgcaP82350 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.67□□□□□ -0.22
SgcaP82350 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.67□□□□□ -0.22
SgcaP82350 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SgcaP82350 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcaP82350 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.66□□□□□ -0.22
SgcaP82350 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.66□□□□□ -0.22
SgcaP82350 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SgcaP82350 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.66□□□□□ -0.22
SgcaP82350 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SgcaP82350 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SgcaP82350 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.66□□□□□ -0.22
SgcaP82350 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SgcaP82350 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SgcaP82350 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcaP82350 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.65□□□□□ -0.22
SgcaP82350 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SgcaP82350 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SgcaP82350 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SgcaP82350 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Gm8495-201ENSMUST00000188740 694 ntBASIC13.65□□□□□ -0.22
SgcaP82350 Gm26524-201ENSMUST00000192339 390 ntBASIC13.65□□□□□ -0.22
SgcaP82350 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.65□□□□□ -0.22
SgcaP82350 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcaP82350 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
SgcaP82350 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
SgcaP82350 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SgcaP82350 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
SgcaP82350 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.64□□□□□ -0.23
SgcaP82350 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.64□□□□□ -0.23
SgcaP82350 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SgcaP82350 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcaP82350 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.64□□□□□ -0.23
SgcaP82350 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms